External SOPs
On this page
This page lists well-established and tested protocols from the International Human Microbiome Consortium IHMS and the Earth Microbiome Project EMP. Both are collections of SOPs that are experimentally validated for their given fields, human and earth microbiome research respectively.
Title | Organisation | Category | Link |
---|---|---|---|
Standard operating procedure for fecal samples identification | International Human Microbiome Standards (IHMS) | Sample Collection | SOP 01 |
Standard operating procedure for fecal samples self-Collection, laboratory analysis handled within 4 hours | International Human Microbiome Standards (IHMS) | Sample Collection | SOP 02 |
Standard operating procedure for fecal samples self-Collection, laboratory analysis handled within 4 to 24 hours | International Human Microbiome Standards (IHMS) | Sample Collection | SOP 03 |
Standard operating procedure for fecal samples frozen preserved self-Collection, laboratory analysis handled within 24 hours to 7 days | International Human Microbiome Standards (IHMS) | Sample Collection | SOP 04 |
Standard operating procedure for fecal samples preserved in stabilizing solution self-Collection, laboratory analysis handled within 24 hours to 7 days | International Human Microbiome Standards (IHMS) | Sample Collection | SOP 05 |
Standard operating procedure for fecal samples DNA Extraction, protocol Q | International Human Microbiome Standards (IHMS) | DNA Extraction | SOP 06 |
Standard operating procedure for fecal samples DNA Extraction, protocol H | International Human Microbiome Standards (IHMS) | DNA Extraction | SOP 07 |
DNA Extraction Protocol | Earth Microbiome | DNA Extraction | DNA Extraction Protocol |
16S Illumina Amplicon Protocol | Earth Microbiome | DNA Sequencing | 16S Illumina Amplicon Protocol |
18S Illumina Amplicon Protocol | Earth Microbiome | DNA Sequencing | 16S Illumina Amplicon Protocol |
ITS Illumina Amplicon Protocol | Earth Microbiome | DNA Sequencing | ITS Illumina Amplicon Protocol |
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Citation
National Research Data Infrastructure for Microbiota Research (NFDI4Microbiota). (2024, September 30). External SOPs. NFDI4Microbiota Knowledge Base.